STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001291445_05400Unannotated protein. (330 aa)    
Predicted Functional Partners:
GCA_001291445_05404
Unannotated protein.
 
     0.756
GCA_001291445_05401
Unannotated protein.
 
    
0.740
A5630_17520
Unannotated protein.
    
 0.684
GCA_001291445_05399
Unannotated protein.
       0.642
GCA_001291445_05402
Unannotated protein.
 
     0.611
A5630_03650
Unannotated protein.
     
 0.556
A5630_11480
Unannotated protein.
    
 0.536
GCA_001291445_05403
Unannotated protein.
       0.532
A5630_03805
Unannotated protein.
   
 0.510
A5630_07325
Unannotated protein.
    
 0.499
Your Current Organism:
Mycolicibacterium mucogenicum
NCBI taxonomy Id: 56689
Other names: ATCC 49650, CCUG 47451, CDC 86-701, CIP 105223, DSM 44625, KCTC 19088, M. mucogenicum, Mycobacterium mucogenicum, strain MO76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.