STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001291445_05405Unannotated protein. (453 aa)    
Predicted Functional Partners:
GCA_001291445_05404
Unannotated protein.
 
     0.855
GCA_001291445_04625
Unannotated protein.
 
 
 0.854
A5630_29740
Unannotated protein.
 
 
 0.853
A5630_09895
Unannotated protein.
 
 
 0.807
A5630_24445
Unannotated protein.
  
  
 
0.801
GCA_001291445_04635
Unannotated protein.
 
 
  0.798
A5630_29730
Unannotated protein.
 
 
  0.790
A5630_25480
Unannotated protein.
 
  
 0.790
A5630_10830
Unannotated protein; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
 
  
 0.786
speE-2
Unannotated protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.
   
  0.763
Your Current Organism:
Mycolicibacterium mucogenicum
NCBI taxonomy Id: 56689
Other names: ATCC 49650, CCUG 47451, CDC 86-701, CIP 105223, DSM 44625, KCTC 19088, M. mucogenicum, Mycobacterium mucogenicum, strain MO76
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.