Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A5630_06495 | A5630_06505 | GCA_001291445_05527 | GCA_001291445_05525 | Unannotated protein. | Unannotated protein. | 0.957 |
A5630_06495 | bioA | GCA_001291445_05527 | GCA_001291445_05524 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.907 |
A5630_06495 | bioD | GCA_001291445_05527 | GCA_001291445_05526 | Unannotated protein. | Unannotated protein; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.967 |
A5630_06505 | A5630_06495 | GCA_001291445_05525 | GCA_001291445_05527 | Unannotated protein. | Unannotated protein. | 0.957 |
A5630_06505 | A5630_11480 | GCA_001291445_05525 | GCA_001291445_00269 | Unannotated protein. | Unannotated protein. | 0.928 |
A5630_06505 | bioA | GCA_001291445_05525 | GCA_001291445_05524 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.999 |
A5630_06505 | bioB | GCA_001291445_05525 | GCA_001291445_05529 | Unannotated protein. | Unannotated protein; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. | 0.990 |
A5630_06505 | bioD | GCA_001291445_05525 | GCA_001291445_05526 | Unannotated protein. | Unannotated protein; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.999 |
A5630_11315 | A5630_11480 | GCA_001291445_04806 | GCA_001291445_00269 | Unannotated protein. | Unannotated protein. | 0.908 |
A5630_11315 | A5630_18930 | GCA_001291445_04806 | GCA_001291445_03283 | Unannotated protein. | Unannotated protein. | 0.999 |
A5630_11315 | bioA | GCA_001291445_04806 | GCA_001291445_05524 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.781 |
A5630_11315 | nadE | GCA_001291445_04806 | GCA_001291445_01385 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.921 |
A5630_11480 | A5630_06505 | GCA_001291445_00269 | GCA_001291445_05525 | Unannotated protein. | Unannotated protein. | 0.928 |
A5630_11480 | A5630_11315 | GCA_001291445_00269 | GCA_001291445_04806 | Unannotated protein. | Unannotated protein. | 0.908 |
A5630_11480 | A5630_18930 | GCA_001291445_00269 | GCA_001291445_03283 | Unannotated protein. | Unannotated protein. | 0.908 |
A5630_11480 | bioA | GCA_001291445_00269 | GCA_001291445_05524 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.739 |
A5630_11480 | nadE | GCA_001291445_00269 | GCA_001291445_01385 | Unannotated protein. | Unannotated protein; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.819 |
A5630_18930 | A5630_11315 | GCA_001291445_03283 | GCA_001291445_04806 | Unannotated protein. | Unannotated protein. | 0.999 |
A5630_18930 | A5630_11480 | GCA_001291445_03283 | GCA_001291445_00269 | Unannotated protein. | Unannotated protein. | 0.908 |
A5630_18930 | bioA | GCA_001291445_03283 | GCA_001291445_05524 | Unannotated protein. | Unannotated protein; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily. | 0.781 |
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