STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATG8C.1Autophagy-related protein. (134 aa)    
Predicted Functional Partners:
LINJ_21_0910
Protein kinase domain-containing protein.
   
 0.771
LINJ_33_0320
Autophagy-related protein 3.
   
 0.766
LINJ_07_0010
Putative ubiquitin activating E1 enzyme.
   
 0.745
ATG4.2
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.
   
 0.735
ATG4.1
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.
   
 0.735
LINJ_36_4040
Uncharacterized protein.
   
 0.515
LINJ_08_0410
Uncharacterized protein.
   
 0.512
LINJ_19_0750
Uncharacterized protein.
   
 0.497
LINJ_22_0400
Uncharacterized protein.
   
  0.497
LINJ_28_1880
Uncharacterized protein.
   
 0.496
Your Current Organism:
Leishmania infantum
NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.