STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG8C.1Autophagy-related protein. (134 aa)    
Predicted Functional Partners:
LINJ_21_0910
Protein kinase domain-containing protein.
   
 0.734
LINJ_33_0320
Autophagy-related protein 3.
   
 0.732
LINJ_07_0010
Putative ubiquitin activating E1 enzyme.
   
 0.731
ATG4.2
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.
   
 0.694
ATG4.1
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.
   
 0.694
LINJ_08_0480
Putative small ubiquitin protein.
   
  
 0.500
LINJ_34_3130
ATPase-like protein; Belongs to the AAA ATPase family.
      
 0.499
VPS4
Vacuolar protein sorting-associated protein 4; Belongs to the AAA ATPase family.
      
 0.491
ATG8
Autophagy-related protein.
      
 0.484
LINJ_22_0400
Uncharacterized protein.
   
 0.482
Your Current Organism:
Leishmania infantum
NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.