STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LINJ_01_0010Uncharacterized protein. (333 aa)    
Predicted Functional Partners:
LINJ_29_2270
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.815
LINJ_11_0160
Uncharacterized protein.
    
 0.659
LINJ_08_1060
Uncharacterized protein.
   
 0.649
LINJ_34_3860
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 0.642
LINJ_29_1670
Putative GTPase activator protein.
    
 0.632
LINJ_08_0540
Protein kinase domain-containing protein.
    
 
 0.606
LINJ_34_0030
Uncharacterized protein; Belongs to the protein kinase superfamily.
    
 
 0.606
LINJ_34_0310
Uncharacterized protein.
    
 0.587
LINJ_32_0520
Putative ras-related rab-4.
   
 0.572
LINJ_18_1080
Putative vacuolar protein sorting complex subunit; Belongs to the VPS16 family.
    
 
 0.560
Your Current Organism:
Leishmania infantum
NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum
Server load: low (14%) [HD]