Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LINJ_13_0680 | LINJ_16_0960 | A4HVK7 | A4HWZ0 | Uncharacterized protein. | Sucrose-phosphate synthase-like protein. | 0.858 |
LINJ_13_0680 | LINJ_18_0900 | A4HVK7 | A4HXW3 | Uncharacterized protein. | Putative dolichyl-P-Man:GDP-ManGlcNAc2-PP-dolichyl beta-1,4-mannosyltransferase. | 0.858 |
LINJ_13_0680 | LINJ_23_1300 | A4HVK7 | A4I0G2 | Uncharacterized protein. | Probable methyltransferase BMT2 homolog; Probable S-adenosyl-L-methionine-dependent methyltransferase. | 0.946 |
LINJ_13_0680 | LINJ_23_1590 | A4HVK7 | A4I0J2 | Uncharacterized protein. | Putative DNA polymerase zeta catalytic subunit. | 0.891 |
LINJ_13_0680 | LINJ_25_1450 | A4HVK7 | A4I1I5 | Uncharacterized protein. | Putative DNA polymerase delta subunit 2. | 0.945 |
LINJ_13_0680 | LINJ_33_1770 | A4HVK7 | A4I939 | Uncharacterized protein. | UDP-GlcNAc:PI a1-6 GlcNAc-transferase. | 0.858 |
LINJ_13_0680 | LINJ_33_1790 | A4HVK7 | A4I965 | Uncharacterized protein. | DNA polymerase. | 0.944 |
LINJ_13_0680 | LINJ_34_2190 | A4HVK7 | A4IA00 | Uncharacterized protein. | Putative dolichyl-P-Man:GDP-Man1GlcNAc2-PP-dolichyl alpha-1,3-mannosyltransferase. | 0.858 |
LINJ_13_0680 | LINJ_35_5220 | A4HVK7 | A4IC43 | Uncharacterized protein. | Putative alpha-1,2-mannosyltransferase. | 0.858 |
LINJ_13_0680 | LINJ_36_6380 | A4HVK7 | E9AHY7 | Uncharacterized protein. | Cytoplasmic tRNA 2-thiolation protein 1; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. | 0.950 |
LINJ_16_0960 | LINJ_13_0680 | A4HWZ0 | A4HVK7 | Sucrose-phosphate synthase-like protein. | Uncharacterized protein. | 0.858 |
LINJ_16_0960 | LINJ_23_1300 | A4HWZ0 | A4I0G2 | Sucrose-phosphate synthase-like protein. | Probable methyltransferase BMT2 homolog; Probable S-adenosyl-L-methionine-dependent methyltransferase. | 0.662 |
LINJ_18_0900 | LINJ_13_0680 | A4HXW3 | A4HVK7 | Putative dolichyl-P-Man:GDP-ManGlcNAc2-PP-dolichyl beta-1,4-mannosyltransferase. | Uncharacterized protein. | 0.858 |
LINJ_18_0900 | LINJ_23_1300 | A4HXW3 | A4I0G2 | Putative dolichyl-P-Man:GDP-ManGlcNAc2-PP-dolichyl beta-1,4-mannosyltransferase. | Probable methyltransferase BMT2 homolog; Probable S-adenosyl-L-methionine-dependent methyltransferase. | 0.662 |
LINJ_18_0900 | LINJ_34_2190 | A4HXW3 | A4IA00 | Putative dolichyl-P-Man:GDP-ManGlcNAc2-PP-dolichyl beta-1,4-mannosyltransferase. | Putative dolichyl-P-Man:GDP-Man1GlcNAc2-PP-dolichyl alpha-1,3-mannosyltransferase. | 0.982 |
LINJ_18_0900 | LINJ_35_5220 | A4HXW3 | A4IC43 | Putative dolichyl-P-Man:GDP-ManGlcNAc2-PP-dolichyl beta-1,4-mannosyltransferase. | Putative alpha-1,2-mannosyltransferase. | 0.591 |
LINJ_23_1300 | LINJ_13_0680 | A4I0G2 | A4HVK7 | Probable methyltransferase BMT2 homolog; Probable S-adenosyl-L-methionine-dependent methyltransferase. | Uncharacterized protein. | 0.946 |
LINJ_23_1300 | LINJ_16_0960 | A4I0G2 | A4HWZ0 | Probable methyltransferase BMT2 homolog; Probable S-adenosyl-L-methionine-dependent methyltransferase. | Sucrose-phosphate synthase-like protein. | 0.662 |
LINJ_23_1300 | LINJ_18_0900 | A4I0G2 | A4HXW3 | Probable methyltransferase BMT2 homolog; Probable S-adenosyl-L-methionine-dependent methyltransferase. | Putative dolichyl-P-Man:GDP-ManGlcNAc2-PP-dolichyl beta-1,4-mannosyltransferase. | 0.662 |
LINJ_23_1300 | LINJ_33_1770 | A4I0G2 | A4I939 | Probable methyltransferase BMT2 homolog; Probable S-adenosyl-L-methionine-dependent methyltransferase. | UDP-GlcNAc:PI a1-6 GlcNAc-transferase. | 0.662 |
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