STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LINJ_15_0060Uncharacterized protein. (1016 aa)    
Predicted Functional Partners:
LinJ01.0780
Probable eukaryotic initiation factor 4A; ATP-dependent RNA helicase which is a subunit of the eIF4F complex involved in cap recognition and is required for mRNA binding to ribosome. In the current model of translation initiation, eIF4A unwinds RNA secondary structures in the 5'-UTR of mRNAs which is necessary to allow efficient binding of the small ribosomal subunit, and subsequent scanning for the initiator codon (By similarity).
   
 0.842
LINJ_30_0560
Nuclear cap-binding protein subunit 2.
    
 0.676
LINJ_34_0370
Putative eukaryotic translation initiation factor 5.
   
 0.652
LINJ_28_1660
Putative DEAD box RNA helicase; Belongs to the DEAD box helicase family.
   
 0.613
LINJ_36_7320
Putative eukaryotic translation initiation factor 3 subunit 8.
   
 
 0.599
LINJ_03_0960
Putative elongation initiation factor 2 alpha subunit.
   
 0.574
LINJ_19_1520
Eukaryotic translation initiation factor-like protein; Belongs to the eukaryotic initiation factor 4E family.
   
 0.546
LINJ_27_1520
Putative eukaryotic translation initiation factor eIF-4E; Belongs to the eukaryotic initiation factor 4E family.
   
 0.546
LINJ_28_2690
Putative eukaryotic translation initiation factor; Belongs to the eukaryotic initiation factor 4E family.
   
 0.546
LINJ_30_0460
Putative eukaryotic translation initiation factor 4e; Belongs to the eukaryotic initiation factor 4E family.
   
 0.546
Your Current Organism:
Leishmania infantum
NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.