Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LINJ_16_0850 | LINJ_21_0040 | A4HWY1 | A4HZL7 | Putative metallopeptidase. | Putative ring-box protein 1. | 0.828 |
LINJ_16_0850 | LINJ_24_1680 | A4HWY1 | E9AH68 | Putative metallopeptidase. | Putative ring-box protein. | 0.828 |
LINJ_16_0850 | LINJ_25_0400 | A4HWY1 | A4I182 | Putative metallopeptidase. | Uncharacterized protein. | 0.999 |
LINJ_16_0850 | LINJ_25_2310 | A4HWY1 | A4I1S0 | Putative metallopeptidase. | Uncharacterized protein. | 0.999 |
LINJ_16_0850 | LINJ_27_1450 | A4HWY1 | A4I2U7 | Putative metallopeptidase. | DNA-directed RNA polymerase II-like protein. | 0.760 |
LINJ_16_0850 | LINJ_28_0420 | A4HWY1 | A4I3B2 | Putative metallopeptidase. | Uncharacterized protein. | 0.935 |
LINJ_16_0850 | LINJ_30_3770 | A4HWY1 | A4I5Z8 | Putative metallopeptidase. | Putative CPSF-domain protein. | 0.953 |
LINJ_16_0850 | LINJ_31_0170 | A4HWY1 | A4I6A8 | Putative metallopeptidase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.787 |
LINJ_16_0850 | LINJ_32_0400 | A4HWY1 | A4I7K3 | Putative metallopeptidase. | Putative proteasome regulatory non-ATP-ase subunit 8. | 0.670 |
LINJ_16_0850 | LINJ_34_0670 | A4HWY1 | A4I9N5 | Putative metallopeptidase. | Putative proteasome regulatory non-ATP-ase subunit 11. | 0.458 |
LINJ_21_0040 | LINJ_16_0850 | A4HZL7 | A4HWY1 | Putative ring-box protein 1. | Putative metallopeptidase. | 0.828 |
LINJ_21_0040 | LINJ_24_1680 | A4HZL7 | E9AH68 | Putative ring-box protein 1. | Putative ring-box protein. | 0.905 |
LINJ_21_0040 | LINJ_25_0400 | A4HZL7 | A4I182 | Putative ring-box protein 1. | Uncharacterized protein. | 0.729 |
LINJ_21_0040 | LINJ_25_2310 | A4HZL7 | A4I1S0 | Putative ring-box protein 1. | Uncharacterized protein. | 0.842 |
LINJ_21_0040 | LINJ_27_1450 | A4HZL7 | A4I2U7 | Putative ring-box protein 1. | DNA-directed RNA polymerase II-like protein. | 0.712 |
LINJ_21_0040 | LINJ_28_0420 | A4HZL7 | A4I3B2 | Putative ring-box protein 1. | Uncharacterized protein. | 0.932 |
LINJ_21_0040 | LINJ_30_3770 | A4HZL7 | A4I5Z8 | Putative ring-box protein 1. | Putative CPSF-domain protein. | 0.930 |
LINJ_21_0040 | LINJ_31_0170 | A4HZL7 | A4I6A8 | Putative ring-box protein 1. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.710 |
LINJ_21_0040 | LINJ_32_0400 | A4HZL7 | A4I7K3 | Putative ring-box protein 1. | Putative proteasome regulatory non-ATP-ase subunit 8. | 0.739 |
LINJ_21_0040 | LINJ_34_0670 | A4HZL7 | A4I9N5 | Putative ring-box protein 1. | Putative proteasome regulatory non-ATP-ase subunit 11. | 0.743 |
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