STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LINJ_25_2310Uncharacterized protein. (437 aa)    
Predicted Functional Partners:
LINJ_16_0850
Putative metallopeptidase.
   
 0.999
LINJ_25_0400
Uncharacterized protein.
    
 0.998
LINJ_32_0400
Putative proteasome regulatory non-ATP-ase subunit 8.
   
 0.906
LINJ_34_0670
Putative proteasome regulatory non-ATP-ase subunit 11.
   
 0.904
LINJ_21_0040
Putative ring-box protein 1.
    
 0.842
LINJ_24_1680
Putative ring-box protein.
    
 0.842
LINJ_30_3770
Putative CPSF-domain protein.
    
 0.836
LINJ_28_0420
Uncharacterized protein.
   
  0.795
LINJ_31_0170
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
  0.779
LINJ_27_1450
DNA-directed RNA polymerase II-like protein.
   
 
  0.760
Your Current Organism:
Leishmania infantum
NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum
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