Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LINJ_01_0050 | LINJ_11_0600 | A4HRC6 | A4HUX0 | Putative carboxylase. | Putative 3-methylcrotonoyl-CoA carboxylase beta subunit. | 0.936 |
LINJ_01_0050 | LINJ_26_0030 | A4HRC6 | A4I1U1 | Putative carboxylase. | Methylmalonyl-coa epimerase-like protein. | 0.968 |
LINJ_01_0050 | LINJ_27_0790 | A4HRC6 | A4I353 | Putative carboxylase. | Putative isovaleryl-coA dehydrogenase. | 0.805 |
LINJ_01_0050 | LINJ_28_0250 | A4HRC6 | A4I398 | Putative carboxylase. | Putative propionyl-coa carboxylase beta chain. | 0.931 |
LINJ_01_0050 | LINJ_28_0260 | A4HRC6 | A4I399 | Putative carboxylase. | Putative propionyl-coa carboxylase beta chain. | 0.992 |
LINJ_11_0600 | LINJ_01_0050 | A4HUX0 | A4HRC6 | Putative 3-methylcrotonoyl-CoA carboxylase beta subunit. | Putative carboxylase. | 0.936 |
LINJ_11_0600 | LINJ_26_0030 | A4HUX0 | A4I1U1 | Putative 3-methylcrotonoyl-CoA carboxylase beta subunit. | Methylmalonyl-coa epimerase-like protein. | 0.674 |
LINJ_11_0600 | LINJ_27_0790 | A4HUX0 | A4I353 | Putative 3-methylcrotonoyl-CoA carboxylase beta subunit. | Putative isovaleryl-coA dehydrogenase. | 0.974 |
LINJ_11_0600 | LINJ_31_3260 | A4HUX0 | A4I7C0 | Putative 3-methylcrotonoyl-CoA carboxylase beta subunit. | Methylcrotonoyl-coa carboxylase biotinylated subunitprotein-like protein. | 0.999 |
LINJ_26_0030 | LINJ_01_0050 | A4I1U1 | A4HRC6 | Methylmalonyl-coa epimerase-like protein. | Putative carboxylase. | 0.968 |
LINJ_26_0030 | LINJ_11_0600 | A4I1U1 | A4HUX0 | Methylmalonyl-coa epimerase-like protein. | Putative 3-methylcrotonoyl-CoA carboxylase beta subunit. | 0.674 |
LINJ_26_0030 | LINJ_27_0310 | A4I1U1 | A4I2L1 | Methylmalonyl-coa epimerase-like protein. | Putative methylmalonyl-coenzyme a mutase. | 0.945 |
LINJ_26_0030 | LINJ_27_0790 | A4I1U1 | A4I353 | Methylmalonyl-coa epimerase-like protein. | Putative isovaleryl-coA dehydrogenase. | 0.690 |
LINJ_26_0030 | LINJ_28_0250 | A4I1U1 | A4I398 | Methylmalonyl-coa epimerase-like protein. | Putative propionyl-coa carboxylase beta chain. | 0.674 |
LINJ_26_0030 | LINJ_28_0260 | A4I1U1 | A4I399 | Methylmalonyl-coa epimerase-like protein. | Putative propionyl-coa carboxylase beta chain. | 0.966 |
LINJ_26_0030 | LINJ_30_0630 | A4I1U1 | A4I589 | Methylmalonyl-coa epimerase-like protein. | Putative nitrate reductase. | 0.737 |
LINJ_26_0030 | LINJ_31_3260 | A4I1U1 | A4I7C0 | Methylmalonyl-coa epimerase-like protein. | Methylcrotonoyl-coa carboxylase biotinylated subunitprotein-like protein. | 0.701 |
LINJ_26_0030 | LINJ_34_1000 | A4I1U1 | A4I9Q2 | Methylmalonyl-coa epimerase-like protein. | Uncharacterized protein. | 0.702 |
LINJ_26_0030 | LINJ_35_5300 | A4I1U1 | A4IC51 | Methylmalonyl-coa epimerase-like protein. | Putative isopentenyl-diphosphate delta-isomerase. | 0.793 |
LINJ_27_0310 | LINJ_26_0030 | A4I2L1 | A4I1U1 | Putative methylmalonyl-coenzyme a mutase. | Methylmalonyl-coa epimerase-like protein. | 0.945 |
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