STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LINJ_26_0030Methylmalonyl-coa epimerase-like protein. (151 aa)    
Predicted Functional Partners:
LINJ_01_0050
Putative carboxylase.
  
 
 0.968
LINJ_28_0260
Putative propionyl-coa carboxylase beta chain.
  
 
 0.966
LINJ_27_0310
Putative methylmalonyl-coenzyme a mutase.
   
 
 0.945
LINJ_35_5300
Putative isopentenyl-diphosphate delta-isomerase.
  
 
 0.793
LINJ_30_0630
Putative nitrate reductase.
  
 
 0.737
LINJ_34_1000
Uncharacterized protein.
    
 0.702
LINJ_31_3260
Methylcrotonoyl-coa carboxylase biotinylated subunitprotein-like protein.
  
 
 0.701
LINJ_27_0790
Putative isovaleryl-coA dehydrogenase.
  
 
 0.690
LINJ_11_0600
Putative 3-methylcrotonoyl-CoA carboxylase beta subunit.
  
 
 0.674
LINJ_28_0250
Putative propionyl-coa carboxylase beta chain.
  
 
 0.674
Your Current Organism:
Leishmania infantum
NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum
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