STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LINJ_26_0260GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis. (497 aa)    
Predicted Functional Partners:
LINJ_16_0020
Uncharacterized protein.
    
 
 0.989
LINJ_27_2140
Putative ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.989
LINJ_14_0840
Uncharacterized protein.
   
 
 0.942
LINJ_01_0280
Pseudouridylate synthase-like protein.
  
 
 0.923
LINJ_32_3210
Uncharacterized protein.
    
 
 0.921
LINJ_34_3470
50S ribosomal protein L13-like protein.
   
 
 0.921
LINJ_35_2940
SpoU_methylase domain-containing protein.
   
 
 0.921
LINJ_35_5180
Uncharacterized protein.
  
 
 0.920
LINJ_11_0020
Uncharacterized protein.
  
 0.911
LINJ_31_0300
Uncharacterized protein.
  
 0.911
Your Current Organism:
Leishmania infantum
NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.