STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LINJ_30_1180Importin subunit alpha; Belongs to the importin alpha family. (539 aa)    
Predicted Functional Partners:
LINJ_34_0510
Putative importin beta-1 subunit.
   
 0.982
LINJ_30_3440
Putative CAS/CSE/importin domain protein.
   
 
 0.947
LINJ_20_0490
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
    
   0.918
LINJ_26_2070
Putative SUMO1/Ulp2.
   
 
 0.843
LINJ_31_1230
Uncharacterized protein.
   
 
 0.796
LINJ_27_0390
Putative nucleoporin.
   
 
 0.786
LINJ_25_1460
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.781
LINJ_30_0560
Nuclear cap-binding protein subunit 2.
   
 
 0.755
LINJ_36_1620
Uncharacterized protein.
   
 
 0.752
LINJ_18_0610
Uncharacterized protein.
   
 
 0.750
Your Current Organism:
Leishmania infantum
NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum
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