STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SGTSmall glutamine-rich tetratricopeptide repeat protein. (408 aa)    
Predicted Functional Partners:
LINJ_35_2900
Uncharacterized protein.
    
 0.933
LINJ_26_1090
Uncharacterized protein.
   
 0.734
LINJ_32_0070
Qa-SNARE protein.
    
 0.625
LINJ_30_0740
Putative CDC16.
  
 
 0.595
LinJ11.0710
ATPase ASNA1 homolog; ATPase required for the post-translational delivery of tail- anchored (TA) proteins to the endoplasmic reticulum. Recognizes and selectively binds the transmembrane domain of TA proteins in the cytosol. This complex then targets to the endoplasmic reticulum by membrane-bound receptors, where the tail-anchored protein is released for insertion. This process is regulated by ATP binding and hydrolysis. ATP binding drives the homodimer towards the closed dimer state, facilitating recognition of newly synthesized TA membrane proteins. ATP hydrolysis is required for ins [...]
   
 0.554
LINJ_29_1700
Uncharacterized protein.
   
 0.539
LINJ_30_3350
UV excision repair RAD23-like protein.
   
 0.539
LINJ_36_4170
Uncharacterized protein.
    
 0.511
LINJ_30_1990
Cyclosome subunit-like protein.
    
 0.502
LINJ_35_3800
Uncharacterized protein; Belongs to the cullin family.
   
 0.497
Your Current Organism:
Leishmania infantum
NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum
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