STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYP40Cyclophilin 40. (354 aa)    
Predicted Functional Partners:
HSP83
Heat shock protein 83-1.
  
 0.801
LINJ_34_0230
Uncharacterized protein.
   
 0.736
LINJ_35_4540
Uncharacterized protein.
   
 0.736
HSP83-2
Heat shock protein 83-1.
  
 0.731
LINJ_33_2520
Putative heat shock protein.
  
 0.731
LINJ_18_0210
Uncharacterized protein.
   
 
 0.714
LINJ_36_5390
Uncharacterized protein.
   
 0.645
CyP3
Putative cyclophilin 3.
    
  0.611
LINJ_27_2430
Uncharacterized protein.
   
 0.602
LINJ_23_1950
Uncharacterized protein.
    
 0.593
Your Current Organism:
Leishmania infantum
NCBI taxonomy Id: 5671
Other names: L. infantum, Leishmania (Leishmania) infantum, Leishmania donovani infantum
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