Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LINJ_10_1170 | LINJ_22_1110 | A4HUM0 | E9AGZ9 | Uncharacterized protein. | Putative ribonucleoside-diphosphate reductase small chain. | 0.561 |
LINJ_10_1170 | LINJ_26_0770 | A4HUM0 | A4I211 | Uncharacterized protein. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.431 |
LINJ_10_1170 | LINJ_26_0780 | A4HUM0 | A4I212 | Uncharacterized protein. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.431 |
LINJ_10_1170 | LINJ_27_1970 | A4HUM0 | A4I2X5 | Uncharacterized protein. | Putative ribonucleoside-diphosphate reductase small chain. | 0.561 |
LINJ_10_1170 | LINJ_28_0980 | A4HUM0 | A4I3G6 | Uncharacterized protein. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.852 |
LINJ_10_1170 | TRYP | A4HUM0 | A4HWK2 | Uncharacterized protein. | Tryparedoxin peroxidase. | 0.807 |
LINJ_10_1170 | TRYP-2 | A4HUM0 | A4HWK3 | Uncharacterized protein. | Tryparedoxin peroxidase. | 0.807 |
LINJ_10_1170 | TRYP-3 | A4HUM0 | Q95NF5 | Uncharacterized protein. | Cytosolic peroxiredoxin. | 0.807 |
LINJ_10_1170 | mTXNPx | A4HUM0 | Q95U89 | Uncharacterized protein. | Putative mitochondrial peroxiredoxin. | 0.807 |
LINJ_22_1110 | LINJ_10_1170 | E9AGZ9 | A4HUM0 | Putative ribonucleoside-diphosphate reductase small chain. | Uncharacterized protein. | 0.561 |
LINJ_22_1110 | LINJ_26_0770 | E9AGZ9 | A4I211 | Putative ribonucleoside-diphosphate reductase small chain. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.902 |
LINJ_22_1110 | LINJ_26_0780 | E9AGZ9 | A4I212 | Putative ribonucleoside-diphosphate reductase small chain. | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | 0.902 |
LINJ_22_1110 | LINJ_27_1970 | E9AGZ9 | A4I2X5 | Putative ribonucleoside-diphosphate reductase small chain. | Putative ribonucleoside-diphosphate reductase small chain. | 0.900 |
LINJ_22_1110 | LINJ_28_0980 | E9AGZ9 | A4I3G6 | Putative ribonucleoside-diphosphate reductase small chain. | Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.998 |
LINJ_22_1110 | TRYP | E9AGZ9 | A4HWK2 | Putative ribonucleoside-diphosphate reductase small chain. | Tryparedoxin peroxidase. | 0.908 |
LINJ_22_1110 | TRYP-2 | E9AGZ9 | A4HWK3 | Putative ribonucleoside-diphosphate reductase small chain. | Tryparedoxin peroxidase. | 0.908 |
LINJ_22_1110 | TRYP-3 | E9AGZ9 | Q95NF5 | Putative ribonucleoside-diphosphate reductase small chain. | Cytosolic peroxiredoxin. | 0.908 |
LINJ_22_1110 | TRYS | E9AGZ9 | A4I2Z3 | Putative ribonucleoside-diphosphate reductase small chain. | Putative trypanothione synthetase. | 0.900 |
LINJ_22_1110 | mTXNPx | E9AGZ9 | Q95U89 | Putative ribonucleoside-diphosphate reductase small chain. | Putative mitochondrial peroxiredoxin. | 0.908 |
LINJ_26_0770 | LINJ_10_1170 | A4I211 | A4HUM0 | Glutathione peroxidase; Belongs to the glutathione peroxidase family. | Uncharacterized protein. | 0.431 |
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