Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000001030annotation not available (157 aa)    
Predicted Functional Partners:
znhit2
Zinc finger HIT-type containing 2.
   
 
 0.990
aar2
AAR2 splicing factor.
    
 
 0.986
eapp
E2F associated phosphoprotein.
    
 
 0.984
snrnp40
Small nuclear ribonucleoprotein U5 subunit 40.
    
 
 0.982
prpf6
pre-mRNA processing factor 6.
    
 
 0.982
cd2bp2
CD2 cytoplasmic tail binding protein 2.
    
 
 0.981
prpf8
pre-mRNA processing factor 8.
    
 
 0.980
snrnp200
Small nuclear ribonucleoprotein U5 subunit 200.
    
 
 0.978
ecd
Ecdysoneless cell cycle regulator.
    
 
 0.976
eftud2
Elongation factor Tu GTP binding domain containing 2.
    
 
 0.975
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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