STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
engaseendo-beta-N-acetylglucosaminidase. (713 aa)    
Predicted Functional Partners:
man2c1
Mannosidase alpha class 2C member 1.
  
  
 0.856
ubb
Ubiquitin B.
     
 0.692
rps27a
Ribosomal protein S27a.
     
 0.687
LOC115013360
Ubiquitin-like protein 4A.
     
 0.642
ENSCGOP00000024769
annotation not available
     
 0.642
zfand4
Zinc finger AN1-type containing 4.
     
 0.642
ENSCGOP00000048404
annotation not available
     
 0.642
ENSCGOP00000048492
ISG15 ubiquitin like modifier.
     
 0.642
ENSCGOP00000049756
Ubiquitin B.
     
 0.642
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
     
 0.642
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.