Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gch1GTP cyclohydrolase 1. (254 aa)    
Predicted Functional Partners:
pts
6-pyruvoyltetrahydropterin synthase.
  
 
 0.980
gchfr
GTP cyclohydrolase I feedback regulator.
    
 0.974
mocs1
Molybdenum cofactor synthesis 1.
    
 0.927
nudt2
Nudix hydrolase 2.
    
  0.902
LOC115007311
GTP cyclohydrolase 1 2-like.
  
  
 
0.902
LOC115025022
GTP cyclohydrolase 1-like.
  
  
 
0.901
LOC115007163
Intestinal-type alkaline phosphatase 1-like.
    
  0.900
LOC115007166
Alkaline phosphatase-like.
    
  0.900
alpl
Alkaline phosphatase, biomineralization associated.
    
  0.900
ENSCGOP00000003187
annotation not available
  
 
 0.821
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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