Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lgr4Leucine rich repeat containing G protein-coupled receptor 4. (965 aa)    
Predicted Functional Partners:
LOC115021374
R-spondin-3-like.
   
 0.995
LOC115013851
E3 ubiquitin-protein ligase znrf3-like.
    
 0.986
rspo2
R-spondin 2.
   
 0.970
ENSCGOP00000024985
R-spondin 4.
   
 0.970
RSPO3
R-spondin-3-like.
   
 0.966
ENSCGOP00000042075
annotation not available
    
 0.946
LGR6
Leucine rich repeat containing G protein-coupled receptor 6.
  
 
 
0.933
rspo1
R-spondin 1.
    
 0.928
lrp5
LDL receptor related protein 5.
    
 0.856
ndp
Norrin cystine knot growth factor NDP.
    
 0.778
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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