Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC115010085Uncharacterized oxidoreductase YjmC-like. (362 aa)    
Predicted Functional Partners:
fh
Fumarate hydratase.
    
 0.829
cs
Citrate synthase.
  
 
 0.812
xylb
Xylulokinase.
    
 0.804
LOC115014266
Malate synthase, glyoxysomal-like.
    
 0.795
oat
Ornithine aminotransferase.
     
 0.769
aadat
Aminoadipate aminotransferase.
    
  0.761
got2
Glutamic-oxaloacetic transaminase 2.
    
 0.759
got1
Glutamic-oxaloacetic transaminase 1.
    
 0.743
LOC115013666
Aspartate aminotransferase, cytoplasmic-like.
    
 0.743
hacl1
2-hydroxyacyl-CoA lyase 1.
    
 0.712
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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