Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000001115Mucin 5f. (497 aa)    
Predicted Functional Partners:
ENSCGOP00000001102
annotation not available
 
 
0.908
ENSCGOP00000009614
annotation not available
 
  
  0.855
MSL3
MSL complex subunit 3.
    
 0.852
MSL2
E3 ubiquitin-protein ligase MSL2-like.
    
 0.777
LOC115027142
E3 ubiquitin-protein ligase MSL2-like.
    
 0.777
snw1
SNW domain containing 1.
    
  0.760
heg1
Heart development protein with EGF like domains 1.
    
 0.717
LOC115008180
Recombining binding protein suppressor of hairless-like protein.
   
 0.708
LOC115015134
Recombining binding protein suppressor of hairless-like.
    
 0.698
rbpj
Recombination signal binding protein for immunoglobulin kappa J region.
    
 0.698
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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