Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000001125annotation not available (308 aa)    
Predicted Functional Partners:
LOC115026096
Thioredoxin domain-containing protein 3 homolog.
    
 0.569
wdr90
WD repeat domain 90.
    
  0.515
gak
Cyclin G associated kinase.
   
 0.498
LOC115012821
Growth factor receptor-bound protein 2-B-like.
   
 0.493
ENSCGOP00000008200
annotation not available
   
 0.493
lrguk
Leucine rich repeats and guanylate kinase domain containing.
    
  0.467
nck2
NCK adaptor protein 2.
    
  0.436
nck1
NCK adaptor protein 1.
    
  0.436
katnal2
Katanin catalytic subunit A1 like 2.
   
  0.432
ENSCGOP00000012855
annotation not available
    
 0.420
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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