Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC115010931Chymotrypsin-like elastase family member 2A. (331 aa)    
Predicted Functional Partners:
LOC115009588
Carboxypeptidase A2-like.
   
 
 0.817
cpa1
Carboxypeptidase A1.
   
 
 0.817
JDP2
Jun dimerization protein 2.
      
 0.696
epdr1
Ependymin related 1.
      
 0.696
zbtb41
Zinc finger and BTB domain containing 41.
    
 
 0.685
rasa1
RAS p21 protein activator 1.
   
  
 0.660
mybpc3
Myosin binding protein C, cardiac.
    
 0.644
LOC115026096
Thioredoxin domain-containing protein 3 homolog.
   
 0.644
LOC115012220
LIM and SH3 domain protein 1-like.
      
 0.638
LOC115006257
Ribonucleoside-diphosphate reductase subunit M2.
      
 0.612
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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