Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000001148TUB like protein 1b. (330 aa)    
Predicted Functional Partners:
ift140
Intraflagellar transport 140.
    
 0.930
ttc21b
Tetratricopeptide repeat domain 21B.
    
 0.908
IFT122
Intraflagellar transport 122.
    
 0.906
wdr35
WD repeat domain 35.
    
 0.876
gpr161
G protein-coupled receptor 161.
    
 0.799
IFT43
Intraflagellar transport 43.
    
 
 0.776
ankrd54
Ankyrin repeat domain 54.
    
   0.724
cdc73
Cell division cycle 73.
    
   0.690
sirt1
Sirtuin 1.
    
   0.687
mpl
MPL proto-oncogene, thrombopoietin receptor.
      
 0.658
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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