Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
porcnPorcupine O-acyltransferase. (452 aa)    
Predicted Functional Partners:
LOC115024637
Proto-oncogene Wnt-3.
    
 0.949
wnt1
Wnt family member 1.
    
 0.922
LOC115021090
Protein-serine O-palmitoleoyltransferase porcupine-like.
  
  
 
0.901
ENSCGOP00000003667
Wingless-type MMTV integration site family, member 3A.
    
 0.887
WNT2B
Protein Wnt-2b-A.
    
 0.884
wnt2
Wnt family member 2.
    
 0.884
LOC115007784
Protein Wnt-2b-A-like.
    
 0.884
LOC115011200
Protein Wnt-5a-like.
    
 0.881
LOC115028439
Protein Wnt-5b.
    
 0.881
wnt4
Wnt family member 4.
    
 0.877
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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