Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
taf11TATA-box binding protein associated factor 11. (203 aa)    
Predicted Functional Partners:
taf10
TATA-box binding protein associated factor 10.
   
 0.999
taf8
TATA-box binding protein associated factor 8.
   
 0.999
taf12
TATA-box binding protein associated factor 12.
   
 0.999
LOC115018572
Transcription initiation factor TFIID subunit 9-like.
   
 0.999
taf2
TATA-box binding protein associated factor 2.
    
 0.999
taf3
TATA-box binding protein associated factor 3.
   
 0.999
taf13
TATA-box binding protein associated factor 13.
    
 0.999
taf7l
TATA-box binding protein associated factor 7 like.
   
 0.999
taf6
TATA-box binding protein associated factor 6.
    
 0.999
taf1
TATA-box binding protein associated factor 1.
    
 0.999
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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