Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC115012284Insulin-like growth factor 2 mRNA-binding protein 1. (600 aa)    
Predicted Functional Partners:
ilf2
Interleukin enhancer binding factor 2.
    
 
 0.702
ENSCGOP00000015766
annotation not available
    
 
 0.701
elavl1
ELAV like RNA binding protein 1.
    
 
 0.701
LOC115003710
Protein lin-28 homolog B-like.
   
 
 0.628
stau1
Staufen double-stranded RNA binding protein 1.
    
 
 0.625
stau2
Staufen double-stranded RNA binding protein 2.
    
 
 0.625
LOC115021874
Protein lin-28 homolog A-like.
   
 
 0.617
usp10
Ubiquitin specific peptidase 10.
   
 
 0.611
LOC115014505
Heterogeneous nuclear ribonucleoprotein A/B-like.
   
 
 0.602
LOC115018559
Heterogeneous nuclear ribonucleoprotein A/B-like.
   
 
 0.602
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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