Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
ANKS1AAnkyrin repeat and sterile alpha motif domain containing 1A. (1079 aa)    
Predicted Functional Partners:
rin1
Ras and Rab interactor 1.
    
  0.862
rpn1
Ribophorin I.
    
 
 0.799
CASK
Peripheral plasma membrane protein CASK-like.
   
 0.703
CASK-2
Calcium/calmodulin dependent serine protein kinase.
   
 0.703
LOC115011637
G-protein coupled estrogen receptor 1.
      
 0.701
ppp1r7
Protein phosphatase 1 regulatory subunit 7.
    
 0.698
EGFLAM
EGF like, fibronectin type III and laminin G domains.
    
 
 0.673
capzb
Capping actin protein of muscle Z-line subunit beta.
    
 
 0.660
lhx9
LIM homeobox 9.
    
 
 0.617
ENSCGOP00000012023
Synaptic Ras GTPase activating protein 1b.
   
 
 0.614
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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