Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
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[Homology]
Score
ENSCGOP00000001240Troponin T type 2b (cardiac). (237 aa)    
Predicted Functional Partners:
LOC115008418
Troponin I, slow skeletal muscle-like.
  
 0.938
tnni1
Troponin I1, slow skeletal type.
  
 0.934
ENSCGOP00000000249
annotation not available
  
 0.911
LOC115009256
Troponin I, fast skeletal muscle-like.
  
 0.906
TNNC1
Troponin C, slow skeletal and cardiac muscles.
   
 0.906
LOC115011379
Troponin C, slow skeletal and cardiac muscles-like.
   
 0.906
TNNI2-4
Troponin I, fast skeletal muscle-like.
  
 0.905
TNNI2-2
Troponin I, fast skeletal muscle-like.
  
 0.901
LOC115009724
Troponin I, slow skeletal muscle-like.
  
 0.887
TNNI2-3
Troponin I, fast skeletal muscle-like.
   
 0.882
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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