Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
slc20a2Solute carrier family 20 member 2. (679 aa)    
Predicted Functional Partners:
ptgfr
Prostaglandin F receptor.
    
   0.511
slc13a4
Solute carrier family 13 member 4.
  
 
 0.478
kars1
lysyl-tRNA synthetase 1.
  
    0.473
LOC115008677
Myogenesis-regulating glycosidase-like.
     
 0.465
LOC115012986
Myogenesis-regulating glycosidase-like.
     
 0.465
ENSCGOP00000011484
annotation not available
     
 0.465
pllp
Plasmolipin.
      
 0.446
flad1
Flavin adenine dinucleotide synthetase 1.
  
  
 0.441
slc37a4
Solute carrier family 37 member 4.
      
 0.441
LOC115006584
Xenotropic and polytropic retrovirus receptor 1 homolog.
      
 0.427
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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