Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
aregAmphiregulin. (236 aa)    
Predicted Functional Partners:
LOC115022485
Epidermal growth factor receptor-like.
     
 0.606
cnih1
Cornichon family AMPA receptor auxiliary protein 1.
     
  0.532
LOC115017188
Probetacellulin-like.
     
 0.501
epgn
Epithelial mitogen.
     
 0.461
vstm4
V-set and transmembrane domain containing 4.
      
 0.447
cnih4
Cornichon family AMPA receptor auxiliary protein 4.
     
  0.438
LOC115016208
Protein FAM83H-like.
  
     0.419
LOC115023750
Uncharacterized LOC115023750.
  
     0.413
LOC115028426
Uncharacterized LOC115028426.
  
     0.405
LOC115014533
mucin-5AC-like.
  
     0.403
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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