Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115013607Granzyme A-like. (257 aa)    
Predicted Functional Partners:
f2rl3
F2R like thrombin or trypsin receptor 3.
    
 0.790
ENSCGOP00000006694
Coagulation factor II (thrombin) receptor-like 2.
    
  0.768
F2RL2
Proteinase-activated receptor 3-like.
    
  0.768
LOC115016995
Proteinase-activated receptor 1-like.
    
  0.757
LOC115016996
Proteinase-activated receptor 2-like.
    
  0.748
LOC115016946
Proteinase-activated receptor 2-like.
    
  0.748
f2r
Coagulation factor II thrombin receptor.
    
  0.713
LOC115026096
Thioredoxin domain-containing protein 3 homolog.
   
 0.644
LOC115025730
Lysyl oxidase homolog 1-like.
    
 0.573
wdr90
WD repeat domain 90.
    
 0.568
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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