Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000001320annotation not available (233 aa)    
Predicted Functional Partners:
sumo1
Small ubiquitin like modifier 1.
    
 0.763
daxx
Death domain associated protein.
    
 
 0.749
LOC115012755
SUMO-conjugating enzyme UBC9-like.
    
 0.712
ube2i
Ubiquitin conjugating enzyme E2 I.
    
 0.712
pin1
Peptidylprolyl cis/trans isomerase, NIMA-interacting 1.
    
  0.660
mecp2
methyl-CpG binding protein 2.
    
 0.643
ep300
E1A binding protein p300.
   
  0.637
LOC115024893
Histone acetyltransferase p300-like.
   
  0.637
DCAF7
DDB1- and CUL4-associated factor 7.
   
 
 0.621
LOC115024307
DDB1- and CUL4-associated factor 7-like.
   
 
 0.621
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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