Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CCNOCyclin O. (345 aa)    
Predicted Functional Partners:
pcna
Proliferating cell nuclear antigen.
   
 
 0.917
ENSCGOP00000001309
annotation not available
   
 0.882
LOC115021983
Cell division cycle protein 20 homolog.
   
 0.882
MCIDAS
Multiciliate differentiation and DNA synthesis associated cell cycle protein.
   
  
 0.862
LOC115007057
Radial spoke head protein 4 homolog A-like.
    
 0.836
plk4
Polo like kinase 4.
   
 0.823
LOC115009895
Wee1-like protein kinase 2.
   
 0.783
LOC115006576
Cyclin-dependent kinases regulatory subunit 1-like.
   
 0.770
LOC115016173
Cyclin-dependent kinases regulatory subunit 1.
   
 0.770
FZR1
Fizzy-related protein homolog.
   
 0.763
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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