Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lrrc2Leucine rich repeat containing 2. (381 aa)    
Predicted Functional Partners:
ENSCGOP00000049571
annotation not available
      
 0.757
ENSCGOP00000039586
annotation not available
      
 0.721
LOC115013165
Dual specificity protein phosphatase CDC14A-like.
    
 
 0.690
ppp1r42
Protein phosphatase 1 regulatory subunit 42.
    
 0.667
LURAP1L
Leucine rich adaptor protein 1 like.
      
 0.666
LOC115008524
Protein FAM219A-like.
      
 0.665
znf511
Zinc finger protein 511.
      
 0.665
clvs2
Sphingomyelin phosphodiesterase acid like 3A.
      
 0.656
ENSCGOP00000048192
annotation not available
   
  
 0.652
neurl2
Neuralized E3 ubiquitin protein ligase 2.
    
 0.645
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.