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The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC115012621Mpv17-like protein. (232 aa)    
Predicted Functional Partners:
mpv17l
MPV17 mitochondrial inner membrane protein like.
  
  
 
0.844
mpv17l2
MPV17 mitochondrial inner membrane protein like 2.
     
0.840
pex19
Peroxisomal biogenesis factor 19.
    
 0.792
pex16
Peroxisomal biogenesis factor 16.
     
 0.698
LOC115013602
Peroxisomal membrane protein 2-like.
     
0.693
ENSCGOP00000051021
Peroxisomal biogenesis factor 5-like a.
     
 0.687
pex13
Peroxisomal biogenesis factor 13.
   
 
 0.665
pex12
Peroxisomal biogenesis factor 12.
     
 0.651
ENSCGOP00000019253
annotation not available
     
 0.645
pex10
Peroxisomal biogenesis factor 10.
     
 0.645
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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