Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
adamts9ADAM metallopeptidase with thrombospondin type 1 motif 9. (1929 aa)    
Predicted Functional Partners:
LOC115007366
A disintegrin and metalloproteinase with thrombospondin motifs 10-like.
    
 0.609
adamts6
ADAM metallopeptidase with thrombospondin type 1 motif 6.
    
 0.609
pofut2
Protein O-fucosyltransferase 2.
     
 0.590
usf1
Upstream transcription factor 1.
   
 
 0.588
ADAMTSL1
ADAMTS like 1.
     
 0.568
LOC115015569
Upstream stimulatory factor 2-like.
    
 
 0.544
LOC115020930
Upstream stimulatory factor 2-like.
    
 
 0.544
adamts18
ADAM metallopeptidase with thrombospondin type 1 motif 18.
   
 0.500
adamts16
ADAM metallopeptidase with thrombospondin type 1 motif 16.
   
 0.500
LOC115020165
Thrombospondin-2-like.
    
 0.493
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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