Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
abcc12ATP binding cassette subfamily C member 12. (1374 aa)    
Predicted Functional Partners:
gopc
Golgi associated PDZ and coiled-coil motif containing.
    
 0.662
derl1
Derlin 1.
    
 0.657
katnal2
Katanin catalytic subunit A1 like 2.
   
 0.629
usp10
Ubiquitin specific peptidase 10.
    
  0.628
LOC115017680
ATP-binding cassette sub-family G member 4-like.
   
 0.613
abcg4
ATP binding cassette subfamily G member 4.
   
 0.613
LOC115004002
Intersectin-2-like.
    
 0.594
itsn2
Intersectin 2.
    
 0.594
LOC115020435
Intersectin-1-like.
    
  0.586
RNF5
Ring finger protein 5.
    
 0.578
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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