Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccdc51Coiled-coil domain containing 51. (431 aa)    
Predicted Functional Partners:
ilvbl
ilvB acetolactate synthase like.
      
 0.738
ccdc58
Coiled-coil domain containing 58.
      
 0.731
sf3b6
Splicing factor 3b subunit 6.
      
 0.728
mrpl45
Mitochondrial ribosomal protein L45.
      
 0.726
LOC115023750
Uncharacterized LOC115023750.
      
 0.725
LOC115023094
ATP-binding cassette sub-family B member 8, mitochondrial-like.
    
 
 0.687
abcb10
ATP binding cassette subfamily B member 10.
    
 
 0.687
adamts18
ADAM metallopeptidase with thrombospondin type 1 motif 18.
      
 0.656
LOC115024348
Rho GTPase-activating protein 23-like.
      
 0.653
arhgap23
Rho GTPase activating protein 23.
      
 0.653
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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