Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115012795Oxysterol-binding protein-related protein 7-like. (929 aa)    
Predicted Functional Partners:
gak
Cyclin G associated kinase.
   
 
 0.700
vapa
VAMP associated protein A.
    
 
 0.590
LOC115010749
Vesicle-associated membrane protein-associated protein B/C-like.
    
 
 0.590
LOC115008555
Vesicle-associated membrane protein-associated protein B-like.
    
 
 0.590
dnajc6
DnaJ heat shock protein family (Hsp40) member C6.
    
 
 0.580
mospd1
Motile sperm domain containing 1.
    
 
 0.512
LOC115006069
Motile sperm domain-containing protein 1-like.
    
 
 0.512
nprl3
NPR3 like, GATOR1 complex subunit.
   
   0.404
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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