Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
tma7Translation machinery associated 7 homolog. (67 aa)    
Predicted Functional Partners:
rpl38
Ribosomal protein L38.
   
 
 0.977
snrpg
Small nuclear ribonucleoprotein polypeptide G.
   
  
 0.965
UBL5
Ubiquitin like 5.
   
    0.919
TOMM7
Translocase of outer mitochondrial membrane 7.
   
  
 0.915
rpl37
Ribosomal protein L37.
   
  
 0.915
LOC115013458
Endonuclease G, mitochondrial-like.
    
   0.904
LOC115013576
Cytochrome c oxidase subunit 7C, mitochondrial.
   
    0.897
rps26
Ribosomal protein S26.
   
  
 0.871
atp5f1e
ATP synthase F1 subunit epsilon.
   
    0.867
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
    0.866
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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