Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
nprl2NPR2 like, GATOR1 complex subunit. (381 aa)    
Predicted Functional Partners:
wdr24
WD repeat domain 24.
    
 0.999
mios
Meiosis regulator for oocyte development.
    
 0.999
nprl3
NPR3 like, GATOR1 complex subunit.
   
 0.999
seh1l
SEH1 like nucleoporin.
   
 0.999
LOC115018872
Ras-related GTP-binding protein A.
    
 0.998
kptn
Kaptin, actin binding protein.
   
 0.997
itfg2
Integrin alpha FG-GAP repeat containing 2.
    
 0.996
SZT2
SZT2 subunit of KICSTOR complex.
    
 0.993
lamp1
Lysosomal associated membrane protein 1.
    
 
 0.980
lamtor2
Late endosomal/lysosomal adaptor, MAPK and MTOR activator 2.
   
 0.973
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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