Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
rer1Retention in endoplasmic reticulum sorting receptor 1. (205 aa)    
Predicted Functional Partners:
LOC115013574
Calnexin-like.
    
 
 0.919
tmed2
Transmembrane p24 trafficking protein 2.
   
 
 0.909
copb2
Coatomer protein complex subunit beta 2.
   
 
 0.884
surf4
Surfeit 4.
   
 
 0.853
ddost
Dolichyl-diphosphooligosaccharide--protein glycosyltransferase non-catalytic subunit.
   
   0.829
atp5po
ATP synthase peripheral stalk subunit OSCP.
    
   0.825
atp5me
ATP synthase membrane subunit e.
    
   0.801
tmed10
Transmembrane p24 trafficking protein 10.
   
 
 0.798
atp5pd
ATP synthase peripheral stalk subunit d.
   
   0.780
LOC115012493
ER lumen protein-retaining receptor 2.
   
 
 0.773
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.