Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC115011882Potassium voltage-gated channel subfamily C member 1-like. (655 aa)    
Predicted Functional Partners:
fau
FAU ubiquitin like and ribosomal protein S30 fusion.
   
  0.908
rpl21
Ribosomal protein L21.
  
 0.695
ENSCGOP00000040490
Ribosomal protein L29.
   
 0.692
rpl30
Ribosomal protein L30.
   
 0.690
rpl34
Ribosomal protein L34.
  
 0.687
rpl24
Ribosomal protein L24.
  
 0.685
rpl31
Ribosomal protein L31.
   
 0.683
rpl15
Ribosomal protein L15.
   
  0.677
LOC115014298
60S ribosomal protein L36a.
  
 0.666
rpl35
60S ribosomal protein L35.
  
 0.662
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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