Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
hao1Hydroxyacid oxidase 1. (371 aa)    
Predicted Functional Partners:
LOC115021989
Serine--pyruvate aminotransferase-like.
  
 0.982
LOC115007237
Serine--pyruvate aminotransferase, mitochondrial-like.
  
 0.982
cat
Catalase.
   
 
 0.969
dao
D-amino acid oxidase.
  
 
 0.947
pgp
Phosphoglycolate phosphatase.
   
 
 0.943
LOC115014601
Glyoxylate reductase/hydroxypyruvate reductase-like.
  
 
 0.941
LOC115009329
Glyoxylate reductase/hydroxypyruvate reductase-like.
  
 
 0.941
agxt2
Alanine--glyoxylate aminotransferase 2.
   
 
 0.931
hao2
Hydroxyacid oxidase 2.
  
  
 
0.903
LOC115014266
Malate synthase, glyoxysomal-like.
  
 
 0.896
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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