Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARVCF | LOC115007953 | ENSCGOP00000001660 | ENSCGOP00000003485 | ARVCF delta catenin family member. | Macrophage-stimulating protein receptor-like. | 0.839 |
ARVCF | LOC115009383 | ENSCGOP00000001660 | ENSCGOP00000045847 | ARVCF delta catenin family member. | B-cadherin-like. | 0.891 |
ARVCF | LOC115020335 | ENSCGOP00000001660 | ENSCGOP00000011334 | ARVCF delta catenin family member. | B-cadherin-like. | 0.891 |
ARVCF | LOC115028887 | ENSCGOP00000001660 | ENSCGOP00000052030 | ARVCF delta catenin family member. | Afadin-like. | 0.845 |
ARVCF | cdh5 | ENSCGOP00000001660 | ENSCGOP00000040783 | ARVCF delta catenin family member. | Cadherin 5. | 0.899 |
ARVCF | ctnna1 | ENSCGOP00000001660 | ENSCGOP00000027658 | ARVCF delta catenin family member. | Catenin alpha 1. | 0.885 |
ARVCF | ctnna2 | ENSCGOP00000001660 | ENSCGOP00000002315 | ARVCF delta catenin family member. | Catenin alpha 2. | 0.885 |
ARVCF | ctnnb1 | ENSCGOP00000001660 | ENSCGOP00000014961 | ARVCF delta catenin family member. | Catenin beta 1. | 0.909 |
ARVCF | met | ENSCGOP00000001660 | ENSCGOP00000025106 | ARVCF delta catenin family member. | MET proto-oncogene, receptor tyrosine kinase. | 0.839 |
ARVCF | mst1r | ENSCGOP00000001660 | ENSCGOP00000001174 | ARVCF delta catenin family member. | Macrophage stimulating 1 receptor. | 0.839 |
LOC115007953 | ARVCF | ENSCGOP00000003485 | ENSCGOP00000001660 | Macrophage-stimulating protein receptor-like. | ARVCF delta catenin family member. | 0.839 |
LOC115007953 | ctnnb1 | ENSCGOP00000003485 | ENSCGOP00000014961 | Macrophage-stimulating protein receptor-like. | Catenin beta 1. | 0.895 |
LOC115007953 | met | ENSCGOP00000003485 | ENSCGOP00000025106 | Macrophage-stimulating protein receptor-like. | MET proto-oncogene, receptor tyrosine kinase. | 0.874 |
LOC115007953 | mst1r | ENSCGOP00000003485 | ENSCGOP00000001174 | Macrophage-stimulating protein receptor-like. | Macrophage stimulating 1 receptor. | 0.877 |
LOC115009383 | ARVCF | ENSCGOP00000045847 | ENSCGOP00000001660 | B-cadherin-like. | ARVCF delta catenin family member. | 0.891 |
LOC115009383 | LOC115028887 | ENSCGOP00000045847 | ENSCGOP00000052030 | B-cadherin-like. | Afadin-like. | 0.431 |
LOC115009383 | cdh5 | ENSCGOP00000045847 | ENSCGOP00000040783 | B-cadherin-like. | Cadherin 5. | 0.744 |
LOC115009383 | ctnna1 | ENSCGOP00000045847 | ENSCGOP00000027658 | B-cadherin-like. | Catenin alpha 1. | 0.907 |
LOC115009383 | ctnna2 | ENSCGOP00000045847 | ENSCGOP00000002315 | B-cadherin-like. | Catenin alpha 2. | 0.907 |
LOC115009383 | ctnnb1 | ENSCGOP00000045847 | ENSCGOP00000014961 | B-cadherin-like. | Catenin beta 1. | 0.983 |
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