Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ccdc120Coiled-coil domain containing 120. (617 aa)    
Predicted Functional Partners:
cep128
Centrosomal protein 128.
    
 0.805
ccdc6
Coiled-coil domain containing 6.
      
 0.744
LOC115012230
Cytohesin-3.
    
 
 0.711
cyth3
Cytohesin 3.
    
 
 0.711
LOC115011894
Cytohesin-1.
    
 
 0.711
LOC115024472
Cytohesin-1-like.
    
 
 0.711
cyth2
Cytohesin 2.
    
 
 0.711
ENSCGOP00000044089
Sodium channel and clathrin linker 1.
    
 
 0.695
LOC115013114
Centrosomal protein of 170 kDa-like.
    
 
 0.691
LOC115027118
Centrosomal protein of 170 kDa protein B-like.
    
 
 0.691
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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