Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC115008533methyl-CpG-binding domain protein 1-like. (684 aa)    
Predicted Functional Partners:
cfap52
Cilia and flagella associated protein 52.
   
 0.920
cfap45
Cilia and flagella associated protein 45.
   
 
 0.911
tekt3
Tektin 3.
   
 
 0.910
atf7ip2
Activating transcription factor 7 interacting protein 2.
    
 0.908
ENSCGOP00000043414
Activating transcription factor 7 interacting protein.
    
 0.908
ENSCGOP00000013019
Chromatin assembly factor 1, subunit A (p150).
    
 
 0.906
cfap20
Cilia and flagella associated protein 20.
    
 
 0.905
mns1
Meiosis specific nuclear structural 1.
   
 0.904
cfap161
Cilia and flagella associated protein 161.
   
 
 0.900
tekt2
Tektin 2.
   
 
 0.893
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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