Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GHRHRGrowth hormone releasing hormone receptor. (415 aa)    
Predicted Functional Partners:
ghrh
Growth hormone releasing hormone.
    
 0.990
LOC115007945
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1.
    
  0.788
gnb1
G protein subunit beta 1.
    
  0.788
LOC115015676
Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-3-like.
    
  0.788
LOC115028338
Guanine nucleotide-binding protein subunit beta-5b-like.
    
  0.788
gnb5
G protein subunit beta 5.
    
  0.788
gnb2
G protein subunit beta 2.
    
  0.788
LOC115022379
Glucagon family neuropeptides-like.
    
 0.785
ADCYAP1
Adenylate cyclase activating polypeptide 1.
    
 0.785
gng3
G protein subunit gamma 3.
   
  0.767
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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