Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000001835Chemokine (C motif) receptor 1a, duplicate 1. (313 aa)    
Predicted Functional Partners:
PSMB11
Proteasome subunit beta 11.
   
  
 0.921
LOC115022721
Chemokine XC receptor 1-like.
  
  
 
0.902
LOC115022633
Chemokine XC receptor 1-like.
     
 
0.900
LOC115021281
T-cell surface glycoprotein CD4-like.
      
 0.629
ENSCGOP00000040428
annotation not available
    
 0.590
ebi3
Epstein-Barr virus induced 3.
      
 0.580
gpbar1
G protein-coupled bile acid receptor 1.
      
 0.526
mppe1
Metallophosphoesterase 1.
      
 0.521
LOC115023615
C-C motif chemokine 4-like.
    
 0.489
LOC115022527
FYVE and coiled-coil domain-containing protein 1-like.
      
 0.435
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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