Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCGOP00000001840annotation not available (276 aa)    
Predicted Functional Partners:
tor3a
Torsin family 3 member A.
   
 
 0.803
tdrd5
Tudor domain containing 5.
  
   
 0.723
tor2a
Torsin family 2 member A.
    
 
 0.700
ENSCGOP00000009078
annotation not available
      
 0.690
LOC115023451
Thioredoxin-like.
    
   0.684
ENSCGOP00000024506
annotation not available
    
 
 0.673
sec16a
SEC16 homolog A, endoplasmic reticulum export factor.
      
 0.643
LOC115007351
Sulfhydryl oxidase 1-like.
      
 0.624
LOC115017027
torsin-1B-like.
    
 
 0.620
LOC115017168
torsin-1B-like.
    
 
 0.620
Your Current Organism:
Cottoperca gobio
NCBI taxonomy Id: 56716
Other names: Aphritis gobio, C. gobio
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